CDS

Accession Number TCMCG015C09276
gbkey CDS
Protein Id XP_027102773.1
Location join(17443576..17443865,17444237..17444439,17444545..17444624,17444681..17444781,17445841..17446057,17447360..17447569,17448284..17448376,17449658..17449864,17450087..17450290,17450931..17451015,17451099..17451416,17452160..17452284,17452963..17453019,17453301..17453504,17453944..17454135,17454256..17454336,17454416..17454540,17454720..17454831,17454902..17455009,17455862..17456016,17456103..17456220)
Gene LOC113724019
GeneID 113724019
Organism Coffea arabica

Protein

Length 1094aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027246972.1
Definition transcription initiation factor TFIID subunit 1-like [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category K
Description Transcription initiation factor TFIID subunit 1 isoform X1
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01001        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K03125        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03022        [VIEW IN KEGG]
map03022        [VIEW IN KEGG]
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0000988        [VIEW IN EMBL-EBI]
GO:0000989        [VIEW IN EMBL-EBI]
GO:0001076        [VIEW IN EMBL-EBI]
GO:0001129        [VIEW IN EMBL-EBI]
GO:0001132        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003712        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004402        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005667        [VIEW IN EMBL-EBI]
GO:0005669        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006352        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006367        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006473        [VIEW IN EMBL-EBI]
GO:0006475        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008080        [VIEW IN EMBL-EBI]
GO:0008134        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009292        [VIEW IN EMBL-EBI]
GO:0009294        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016407        [VIEW IN EMBL-EBI]
GO:0016410        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016573        [VIEW IN EMBL-EBI]
GO:0016591        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016746        [VIEW IN EMBL-EBI]
GO:0016747        [VIEW IN EMBL-EBI]
GO:0017025        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0018193        [VIEW IN EMBL-EBI]
GO:0018205        [VIEW IN EMBL-EBI]
GO:0018393        [VIEW IN EMBL-EBI]
GO:0018394        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034212        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043543        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044764        [VIEW IN EMBL-EBI]
GO:0044798        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0045944        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051123        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0061733        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065004        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070897        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071824        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090575        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCTTTTTGAAATTCAAGATAATAAGGACAGTAAGCATCTTAGGCTTCATGCTGGTGCTATGATTATAACCCGTTCAGTCAAGCCTAGTACTGGTGACTCTGTCGAGCTACATAGTCATGGAGGTCTTTCAGGAGGTAGGTTTAACATCTCAAATGACAAATTTTACTCAAATAGGAAATCTTCCCAGCAGGTGAAATCACATATGAAGAAGCGTACAGCTCATGGTCTCAAAGTTCTGCATTCAATTCCAACACTTAAGCTGCAGACGATGAAAGTTAAGCTAAGCAATAAAGATATTGCTAATTTCCATCGACCAAAAGCTTTATGGTATCCTCATGATAATGAGGTGGCACTGAAAGAACAAGAGAAGCTGTCTACGCAAGGACCTATGAAGGTCATATTAAAGAGTTTGGGAGGCAAAGGATGTAAACTTCATGTGGATGGCGAGGAGACCATCTCTTCAGTTAAAGCTAAAGCTTCAAAGAAACTAGATTTTAAATTGTCTGAGCCAGTGAAAGTGGTTTATTCTGGAAAGGAGCTAGAAGACCACAAGGCTCTTGCTGCACAAAATGGCACAAAAAATCCTGGTGAGAACAAGTCTTTGCGTCCTCCTGGGGCATTTAAGAAGAAGTCCGATCTTTCAGTAAAGGATGGTCATGTCTTTCTGATGGAATACTGTGAAGAAAGACCTTTACTCCTGGGAAATGTGGGAATGGGTGCAAGACTGTGCACTTACTACCAAAAGTCTGCCCCTGGTGATCAAACAGGGAACTTAATGCGAAATGGGAATAACGGATTGGGGAGTGTTTTAATCCTAGATCCTGCTGATAAATCCCCTTTTTGGGGACATAAAACCTGGTTGCAGTCAATCATCTCTCGAAACCAATATGAGCCTCACATCGAGGTAATGTCTCCTGGATCAAAAAGTGTTCAAACATACATTATGAACAGGTTGATGGTGTACATGTATCGTGAGTTTTCTGCTGCTGAGAAGCGTGGGTTACGGCCTTCTATACGCGCTGATGAGTTGTCTGCACAGTTTCCCAGCCTGTCAGAAGCATTTCTTCGGAAAAGGCTAAAACATTGTGCTGATTTGCAGAGAGGATCAATGGACAGCTTCTTGGGCTATGAGGCGCAATTTCCGCATTCCTTTGGAGGAGGAACTAAGGAGGATGTGGTGACACCAGAGAATGTTTGTGCCTATGAAAGCATGCAAGCTGGCTTGTACAGGCTCAAGCGGTTGGGAATTACTAGGTTAACTTCACCAACAGGCCTGTCATCTGCAATGAATCAGCTTCCAGATGAAGCTATTGCGTTAGCTGCTGCATCTCATATTGAAAGGGAGCTGCAAATAACACCATGGAACTTGAGTAGCAACTTTGTTGCCTGCACAAATCAGGACAGGGAAAATATTGAACGTTTGGAAATTACAGGTGTTGGTGATCCATCTGGACGTGGGCTAGGTTTCAGTTTTGTTCGTAATACTCCTAAGGCACCTGTATCAAATACAATGGTGAAGAAAAAGGCAGTTGTTGGTAAAGGTTCAACAGTAACCGGTACCGATGCCGATCTACGCAGATTGAGCATGGAAGCTGCACGAGAGGTTCTCCTCAAATTCAATGTACCAGAGGAGCAAATAGCTAAGCAGACTAGGTGGCATCGAATTGCTATGATTCGGAAGCTTTCAACTGCAGCAGCAGACGAGAGAAAAATGTCAGGAAATATGGATCGACAAGTTCAAAGTCTTTCTGCTGTTGAGGGTGAAGAAAATGAAAGTGACTCTGAAGCCAACAGTGACCTAGATTCCTTTGCTGGGGATTTGGAAAATCTTCTGGATGCAGAAGAGTGTGAAGATGGTGAAGATGGTAATAATGTTTCCAAGAATGATATCATTGATGGGGTTAAGGGGATTAAGATGAGAAGGCGACCTTTCCAAGCACAGGCAGAGGAGGAAATTGAAGATGAGGCTGCTGAAGCAGCTGAGTTGTGCAGAATGCTTATGGATGATGATGAAGCTGATAGAAAGAAGAAGAAAAAAGTTAAAGTTGGAGGGGACCAAGTTCGGTTGGGTTCAGTCTCGCAATTGAAGCTTGGTGTTGAGAATGTTGAGCGAATACAGAAAACGAACAATAATGAGGAGATAGTCAGTGACATTGACTGGTGGAGGTTGCAGGATGCATGGTGTTCTGACGAGAATATTTCAGCTAAAAAGAACTTATCCGGGAAACTTAAAGCAAAGAAGAAGAATGACATTGAACAGATGGAGCTTCTAAAAAAGAAAGTTAAAATATTGGTGATGGAATTAAGGTATCTCTCTTTGTTACTGGATGTCCCTGTCTTGTTGCTGTGTGATGGGAACAATTCTGTGTTTCATTCATTTTATACCATGCTGGCAGATCAACCCCAGCAGAAAACTTCTACAAAGAAGCTCATACAGAAAAGTGCAACCAAAATTGCTGTGGTTGAAGCCCACGAGGATGACAAGTCTAGTACAAAGGCAAAAATTCTGAAGGTCAAATGTGGCACAACTGACAAACCCCCCGATAAGCTCACTCCTGCCACATCACAGAATTCTGACAAACCTCCACCAACAGAGTCTGATAGAGACCAGCCTCGCAAGAAAATCATAATCAAACGGCCAAAGGAGGTTATAAATGTGGATGACGGTCGAGAAATCAAATATTTCACTGACCAAGCAGCAAGCAAGAAGAACAGAGAGGAGAAGAGATGGTTGGAAGAGGAGGAGAAGAGGAGGTTTGCTATCAGACAAAAAGAAGAAAGAGCCCGAAGAAGAAATGACAGGAGGATACCAGACAGAACAGCAAAGAGGAAACCAGGACCTGATACCGGAAGATACAGTGCTGGCTATGGCCCAGCAACAAAGCGCAGACGAGGGGGAGAGATGTTGAAATCTGCTTCATCCATAGGACTCTCACCCTCACCCCTCCTCCCCCCACCCTGTGAAAACCTGAGCAATGATTTGGAGCTTGCTACCATCATTCAATGGATGGTTGGCTTGTCAAACATCCTGGAAAGCATTGTGGAGACTCTCAAGGAGAAGCAAGAGATTTCCTATCTTTTTTTAAAGCCAGTTTCCAAGAAGGACGCTCCTGACTACCTTGATATCATAAAGCGACGATGGATCTGTCCACAATCCGTGAAAAGACGCAACCCAGGTATTCCTCCATTGGCTGATCAGCTTCTGGAGCTTTGTGACTATTTATTAGATTTGAATGATGCTGACTTAAGGGAAGCTGAAGCTGGTATTGAACATGGAGATTGA
Protein:  
MLFEIQDNKDSKHLRLHAGAMIITRSVKPSTGDSVELHSHGGLSGGRFNISNDKFYSNRKSSQQVKSHMKKRTAHGLKVLHSIPTLKLQTMKVKLSNKDIANFHRPKALWYPHDNEVALKEQEKLSTQGPMKVILKSLGGKGCKLHVDGEETISSVKAKASKKLDFKLSEPVKVVYSGKELEDHKALAAQNGTKNPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLGNVGMGARLCTYYQKSAPGDQTGNLMRNGNNGLGSVLILDPADKSPFWGHKTWLQSIISRNQYEPHIEVMSPGSKSVQTYIMNRLMVYMYREFSAAEKRGLRPSIRADELSAQFPSLSEAFLRKRLKHCADLQRGSMDSFLGYEAQFPHSFGGGTKEDVVTPENVCAYESMQAGLYRLKRLGITRLTSPTGLSSAMNQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFSFVRNTPKAPVSNTMVKKKAVVGKGSTVTGTDADLRRLSMEAAREVLLKFNVPEEQIAKQTRWHRIAMIRKLSTAAADERKMSGNMDRQVQSLSAVEGEENESDSEANSDLDSFAGDLENLLDAEECEDGEDGNNVSKNDIIDGVKGIKMRRRPFQAQAEEEIEDEAAEAAELCRMLMDDDEADRKKKKKVKVGGDQVRLGSVSQLKLGVENVERIQKTNNNEEIVSDIDWWRLQDAWCSDENISAKKNLSGKLKAKKKNDIEQMELLKKKVKILVMELRYLSLLLDVPVLLLCDGNNSVFHSFYTMLADQPQQKTSTKKLIQKSATKIAVVEAHEDDKSSTKAKILKVKCGTTDKPPDKLTPATSQNSDKPPPTESDRDQPRKKIIIKRPKEVINVDDGREIKYFTDQAASKKNREEKRWLEEEEKRRFAIRQKEERARRRNDRRIPDRTAKRKPGPDTGRYSAGYGPATKRRRGGEMLKSASSIGLSPSPLLPPPCENLSNDLELATIIQWMVGLSNILESIVETLKEKQEISYLFLKPVSKKDAPDYLDIIKRRWICPQSVKRRNPGIPPLADQLLELCDYLLDLNDADLREAEAGIEHGD